Publications and software

1. James A. Fellows Yates, Sam W, Alexander Ramos, Moritz E. Beber, nf-core bot, Matthias Hörtenhuber, Lili Andersson-Li, Paul Cantalupo, Júlia Mir Pedrol, Maxime U Garcia, & yuxinNing. (2026). nf-core/createtaxdb: v2.1.0 - Gracious Goblin - [2026-02-10] (2.1.0). Zenodo. DOI: https://doi.org/10.5281/zenodo.18598441.

2. Muffato, M., Butt, Z., Chafin, T., Challis, R., Downie, J., Kumar, S., Pointon, D.-L. B., Qi, G., Ramos Díaz, A., Sims, Y., Surana, P., & Yates, B. (2026). sanger-tol/blobtoolkit v0.10.1 - Onix (patch 1) (0.10.1). Zenodo. DOI: https://doi.org/10.5281/zenodo.19334157.

3. Fernandez-Valverde, S. L.; Aguilera, F.; Ramos-Díaz, R. A. Inference of Developmental Gene Regulatory Networks Beyond Classical Model Systems: New Approaches in the Post-Genomic Era. Integrative and Comparative Biology 2018, 58 (4), 640–653. DOI: https://doi.org/10.1093/icb/icy061.